BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E07SP1|AL428399
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig967 867 0.0
3x_Contig1380 740 0.0
>3x_Contig967
Length = 3110
Score = 867 bits (437), Expect = 0.0
Identities = 449/453 (99%)
Strand = Plus / Plus
Query: 1 atctcctagaaaggagaataacatacttgacaggacaaatcttttcgacctgcgaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 atctcctagaaaggagaataacatacttgacaggacaaatcttttcgacctgcgaaagat 2709
Query: 61 ttcagaagcttcttatactgcagaggatgaatccaatttcaataggccatttacaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 ttcagaagcttcttatactgcagaggatgaatccaatttcaataggccatttacaggagt 2769
Query: 121 tgcaggaggtgaaactattcaaattacaacttccatcaaggacagcttcgtaccatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2770 tgcaggaggtgaaactattcaaattacaacttccatcaaggacagcttcgtaccatcacc 2829
Query: 181 ggagacttctcataaaataagattcgccgcagataatgtaattccattgagcaaagcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2830 ggagacttctcataaaataagattcgccgcagataatgtaattccattgagcaaagcaca 2889
Query: 241 aattatagaaaattctgcatccgaagctgatgaagatgattcaaatgaagaagacggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2890 aattatagaaaattctgcatccgaagctgatgaagatgattcaaatgaagaagacggaga 2949
Query: 301 ggaggaatcagattcctcttctagattttcattcgaaaacggtaatgatctgtgtggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2950 ggaggaatcagattcctcttctagattttcattcgaaaacggtaatgatctgtgtggaag 3009
Query: 361 aacagcttctttgaaatattactcaactgaaacaaataccccaccactgtacgtgaatga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3010 aacagcttctttgaaatattactcaactgaaacaaataccccaccactgtacttgaatga 3069
Query: 421 tatatatgagaacgataattttgacgatgaaat 453
||||||||| ||| |||||| ||||||||||||
Sbjct: 3070 tatatatgataactataattgtgacgatgaaat 3102
>3x_Contig1380
Length = 6718
Score = 740 bits (373), Expect = 0.0
Identities = 374/375 (99%)
Strand = Plus / Minus
Query: 511 ggacaatacagcgttatcaggctttgcaggaatgtgtacgttgtcagacgacgaatttga 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6718 ggacaatacagcgttatcaggctttgcaggaatgtgtacgttgtcagacgacgaatttga 6659
Query: 571 tcgcacaaatgcagcaatatcacaagaattatcatcgcactcgtcccagtcgtccaaagg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6658 tcgcacaaatgcagcaatatcacaagaattatcatcgcactcgtcccagtcgtccaaagg 6599
Query: 631 atatactgaaagacagagaggcttttccaaacgcgattcaaacaaaagttttgaagatgg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6598 atatactgaaagacagagaggcttttccaaacgcgattcaaacaaaagttttgaagatgg 6539
Query: 691 gaatgacgattatgacccgtcaaaccattgccgatcgtatcatgatatatatwacttaag 750
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6538 gaatgacgattatgacccgtcaaaccattgccgatcgtatcatgatatatataacttaag 6479
Query: 751 tgacgaagaagaagcgcaaactatcaacaagaaagttactgaacctcgtaaaagaaaaat 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6478 tgacgaagaagaagcgcaaactatcaacaagaaagttactgaacctcgtaaaagaaaaat 6419
Query: 811 ttctgatgggactaataaagttaccaaatacgctgacatgtttttgctcagtgacgatga 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6418 ttctgatgggactaataaagttaccaaatacgctgacatgtttttgctcagtgacgatga 6359
Query: 871 tgcggaaagtggttc 885
|||||||||||||||
Sbjct: 6358 tgcggaaagtggttc 6344
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9095
Number of Sequences: 1807
Number of extensions: 9095
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 2
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)